error during installationi of KisSplice

Question

[yoyofangliu]

Hello, I was trying to install KisSplice on a HPC (not a root user). After successfully running cmake . and typed make install, I got this:

[  1%] Building CXX object debruijn-v4/CMakeFiles/ks_debruijn4.dir/main.cpp.o
cc1plus: error: unrecognized command line option "-std=c++11"
make[2]: *** [debruijn-v4/CMakeFiles/ks_debruijn4.dir/main.cpp.o] Error 1
make[1]: *** [debruijn-v4/CMakeFiles/ks_debruijn4.dir/all] Error 2
make: *** [all] Error 2

Could someone tell me how to fix this? Or what favor I should ask my administrator for?

By the way, I have 9 samples of 3 conditions. Would it be less sufficient if I want to call SNPs?

Many thanks

[GenoMax]

What version of g++ --version are you running? You need to update g++ to v. 4.3 or better based on that error.

[yoyofangliu]

Thanks for the reply

g++ --version g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-17) Copyright (C) 2010 Free Software Foundation, Inc.

Looks like it's v. 4.4

[leandro.ishi.lima]

Hello,

According to https://gcc.gnu.org/projects/cxx-status.html#cxx11 , GCC 4.8.1 was the first feature-complete implementation of the 2011 C++ standard. Is it possible for you to upgrade your GCC to 4.8.1 or higher?

Thanks for the report.

[leandro.ishi.lima]

Hello yoyofangliu,

Were you eventually able to make KisSplice run? We still wait your response.

Thanks.

[vectorio9128]

Which version of KisSplice did you try to install ? Do not trust KisSplice 2.4.0-p1 I failed to install it on CentOS 6.7 as it throws the same error you had, even when I upgraded GCC to GCC 4.8.2. However, KisSplice 2.4.0 installed with no problem at all.