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8.3 years ago
Learner
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Actually I have a very large gene set of worm and I am trying to homologue it to human or mouse. I know already two online web base that do this but they are not working well and probably not anymore used or updated.
Any suggestion? if you have any solution with any programming language , please share
Thanks
@Sej Mocha do you know how to use it for my purpose ? because I have never used it
You can use ensembl api (link above) that explains in detail how to install the api and also has multiple examples of various methods integrated in ensembl api. You can also check out EBI website for the video tutorials.
@Sej Mocha thanks I checked it out, this is definitely a pain and it is absolutely not user friendly and more importantly out of date , over 5 years no one touch this !!! how can I trust the annotation ?
Did you know that Ensembl databases are updated regularly up to 4 times a year. New annotations and genome builds are added/updated in each release. It is a really useful resource. Check out the latest release - July 2016
@Sej Mocha oh I was not aware of this!!!!! I think you very much for giving me the chance to see it is updated , so I can trust it though. !!!!