Iterated Double Dynamic Programming Using Java. (Help Needed Urgently!)

Question

[Crocodile]

I have a project on Double Dynamic Programming. I am suppose to use Superposition and Dynamic Programming together, but I don't know how to go about doing it. Can someone help me get started? I don't really understand the notes I got from websites. It's a bit too difficult to digest what they mean. Can someone explain to me in layman terms.

I need to write JAVA codes for this programming. Thank you!

[Giovanni M Dall'Olio]

maybe this could be of help: http://dna.cs.byu.edu/DrugDockCapstone/pathway/chapter9.pdf

[Istvan Albert]

Great find Giovanni, you should put this as an answer!

[Bilouweb]

I agree, it's a great reference document !

[Giovanni M Dall'Olio]

thank you, but maybe the OP is already aware about that resource... it was the first entry on google for 'double dynamic programming superposition' :-)

[Crocodile]

Hi there. Thank you people. I have found that link too. But I don't know how to go about doing it. ): I don't know where should I start from.

Answer 1

[Istvan Albert]

I'm going to post Giovanni's comment here so that the question does not look like it was not answered:

The following resource seems to be what you are looking for: http://dna.cs.byu.edu/DrugDockCapstone/pathway/chapter9.pdf

[Crocodile]

Hi there. Thank you people. I have found that link too. But I don't know how to go about doing it. ): I don't know where should I start from.

[Istvan Albert]

I think it is fair to say that this is pretty difficult algorithm to implement. It is probably not clear to us what your skills and preparations are. For example could you easily write a code that transforms a structure (translates and rotates) and then computes the RMDS? If the answer is yes then do this then follow the pseudocode. If the answer is no then I think the problem might be too difficult for your current level of preparation.