GWAS: how to do hypothesis testing is phenotypes are continuous?

Question

[haohanw]

Chi-Squared test will not apply if phenotypes are continuous, right? because we cannot separate case and control any more.

[GouthamAtla]

How To Ask Good Questions On Technical And Scientific Forums

Answer 1

[vakul.mohanty]

I'm no expert at this but a linear regression model might work in your case