micorarray gene expression data
0
0
Entering edit mode
8.3 years ago
bioinfo ▴ 60

Hi I preprocessed the data using RMA and mapped to the gene symbol but found out repeated gene symbol with different expression values. How to get unique gene symbol??? Thanks

gene • 2.0k views
ADD COMMENT
1
Entering edit mode

Which array is this? You have duplicated gene names because many genes have multiple probes (e.g., for different transcripts).

ADD REPLY
0
Entering edit mode

So what all steps can i do to get the unique genes?? This is for affymetrix platform.

ADD REPLY
0
Entering edit mode

Which affymetrix array?

ADD REPLY
0
Entering edit mode

The GeneChip Human Genome U133 Plus 2.0 Array

ADD REPLY
0
Entering edit mode

I think the affy package has a method for that. It's been a few years though...

ADD REPLY

Login before adding your answer.

Traffic: 1614 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6