Generate gene correlation network from mirna data
0
0
Entering edit mode
8.3 years ago

Hello guys,

I would like to generate a gene correlation network where the data is mirna expression.

To help in this process , I have the mirna-genes targets data. However, I checked these data and I was able to observe that there are some mirna for a gene, thus how can a gene bind to a specific miRNA or vice-versa?

About the network correlation , I'm using spearman correlation where the correlations above 0.8 are 1 and below 0.8 is 0 in the correlation matrix.

Does anyone have an idea to proceed this?

Thank you very much.

mrna mirna gene correlation network • 2.2k views
ADD COMMENT
0
Entering edit mode

For network correlation have a look on WGCNA.

ADD REPLY

Login before adding your answer.

Traffic: 2058 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6