Total genome size Velvet
1
0
Entering edit mode
8.2 years ago

How may I find the total genome size after run the assembly by Velvet assembler?
Assembly Velvet Genome size • 1.9k views
ADD COMMENT •
1
Entering edit mode
8.2 years ago
mastal511 ★ 2.1k

The last line in the velvet Log file gives some stats about the run, including the size of the assembly.
ADD COMMENT •
0
Entering edit mode

Is the total length in the log file the kmer length or nucleotide length?

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 2209 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6