libraries/packages implementing profile-profile alignment with Dirichlet mixture
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8.2 years ago
a.abnousi ▴ 30

I need to perform profile-profile alignments of protein sequences using PROFMAKE/PROFANAL (Gribskov et al. Profile analysis: Detection of distantly related proteins) and Dirichlet Mixtures. If there was a library/package that I could use it would help me a lot, eliminating the need to re-implement them.

I have checked the Biopython but couldn't find anything. Do you know any packages/libraries that might have them? Thanks! any language would work.

profile alignment python C/C++ • 1.2k views
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