Enzyme (Ec Number) - Description Mapping
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14.3 years ago

I am looking for a tab-delimited text file for enzyme ID and it's description. I have several enzyme ids like this

1.7.99.1 
1.14.13.39

I would like to retrieve their respective enzyme names as follows.

1.7.99.1 hydroxylamine reductase
1.14.13.39 nitric-oxide synthase

Please let me know if you know about such a file available for download. Thanks in advance.

enzyme mapping • 5.8k views
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EDIT: None of these databases provides such an index file, but this can be easily obtained parsing the ID and DE records from enzyme.dat file suggested by Lars. Brenda also provides this information with greater detail. All answers are great pointers, I will select best answer as the one with max. votes by tomorrow.

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7
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14.3 years ago

I would suggest that you download the ENZYME flatfile from ExPASy. It is very easy to parse and provides precisely the information that you ask for.

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Thanks Lars, ID & DE is the information I am looking for.

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Yes, I should have been nice and explicitly said that ;-)

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14.3 years ago
Rajarshi Guha ▴ 880

BRENDA would probably be a good source (especially for accepted names).

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I will check Brenda.

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Registering to Brenda was tough. But I got the data finally. Brenda provides different categories of names in a comprehensive way.

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Thanks Pierre. I need to get the accepted name from the list of NAME(s). Any idea which one from the list of NAME(s) could be the accepted name ?

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