How to count exon numbers from a GFF format file
0
0
Entering edit mode
8.2 years ago
Art • 0

Hello ! I need your help! This links shows my GFF format file :https://github.com/LTMabel/cosera/blob/master/Ptrichocarpa.thin.gff I am a undergraduate, new in perl, and I want to learn Bioinformatics on my postgraduate. I want to ask for a perl script , this perl script contains sequence length, exon numbers, whether in plus strand or minus strand. Thank you very much!

sequence perl GFF format • 2.5k views
ADD COMMENT
1
Entering edit mode

Did you try any thing by yourself first? or show the people here the code that you are trying to write, then they can help

ADD REPLY
0
Entering edit mode

https://github.com/LTMabel/cosera/blob/master/count_cds_num.pl I think it is very difficult for me ,because I cannot even found similar script......or more information about GFF format.

ADD REPLY

Login before adding your answer.

Traffic: 1614 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6