Extract features,one feature vector, from each coding/non-coding sequence.

Question

[gy852507309]

Hey,

I downloaded the coding and noncoding genes from biomart and got the .fa files,and the task asks for Extract features for the coding and non-coding sequences

Any ideas?thank you i advance

[Jorge Amigo]

the task asks? the task provider will be surely able to help you more than us.

[GenoMax]

Not clear what exactly you are asking here. What features are you trying to extract (e.g. exons, introns from coding genes)? Did you just get plain fasta sequence from BioMart (you could have exported exon intron sequences directly from BioMart).

[gy852507309]

what features do u use usually? the task is like I need to extract some features from coding and non-coding sequences,and take them as attributes ,the labels:coding and noncoding as target function,then I will train these data with machine learning algorithms:)