Viral Genome Annotation / Website

Question

[Arash]

Hi Colleagues,

What's the best online website or tool for viral genome annotation?

Thanks

[Farbod]

Maybe it is better to edit your question title to "Viral Genome Annotation / Website".

[Arash]

Dear Farbod,I changed title.Thanks for your help.

[Farbod]

Thank you for your attention, it helps people to answer you more accurately and others to find their answer.

Ghorbanat and good luck!

[Arash]

Farbod jan , I did map reads (Case / Control) to Gallus Gallus genome Fasta file (iGenome) by Geneious software.The software produce31 map files.When I want to calculate expression level , but I got the following message : You have to use ref file with mRNA annotation" Please help me to select correct ref file.Thanks.

Answer 1

[Farbod]

Hi Arash,

Have you tried VIGOR or NCBI viral genomes ?

and in this post there are some sharing about personal experiences .

~ Best

[Arash]

Thanks,i did with VIGOR