Rmarkdown report from multiple images
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1
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8.1 years ago
Parham ★ 1.6k

Hi, I want to make an R markdown report and I want to include multiple images from a local folder (not from running code) into the report. However, since there are many images I prefer to use some form of automation (regex, etc) to include all the .png images in a folder. I was not successful so far and I couldn't find a workaround to that. Does anyone have any experience how to do that? Thanks!

markdown R pandoc knitr • 6.4k views
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8.1 years ago
ddiez ★ 2.0k

You need to do as suggested by Zaag to get the image file names but you also need some special care in order to include the images. One is to use results = 'asis' in the chunk options. The other is to create the ![image_label](image_filename) entries. This is an example that worked for me:

```{r, results='asis'}
files <- list.files(path = "Desktop", pattern = "png", full.names = TRUE)
for (f in files) {
  cat(paste0("![image_label](", f, ")\n"))
  }
```
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Thanks ddiez and zaag. It was a smart solution. Very big help!

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Thank you so much for this solution. I've been searching for something like this for hours.

Instead of a newline, I've added a page break between each image. Now, is it possible to center these images vertically on the page?

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8.1 years ago
Zaag ▴ 870
img_list <- list.files( path = '/path/to/imgfolder/',  pattern = '*.png$'")

This gives you a list (img_list) with all the filesin the folder /path/to/imgfolder/ that end ($) in .png

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Thanks! Maybe I was not clear enough. Making the list is not a problem. The problem is that I can't make the list object work in insert image command.

```{r}
files <- list.files(path="/path/to/files", pattern="*.png$", full.names=T, recursive=FALSE)
```
![](files)

It doesn't work this way since, ![](path) should be out of {r} signs and I cannot run a loop without having that.

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As ddiez explains, I'd use something like this:

```{r, results='asis'}
img_list <- list.files( path = 'D:/img/',  pattern = '*.png$')

for (img in img_list){
  cat(paste("![img](/path/to/files/", img, sep='' ) , ")\n")

  }
cat("  \n")
```
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See my answer for an example on how to get this.

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