Gene Expression From Illumina HT-12: How to get GO Terms?

Question

[questionaire]

Hello All:

I have outputs in IDATs from Illumina HT-12. I was wondering if there is any R tools that can read the IDATs into R and do differential expression then get me the GO Terms? Thank you in advance.

[poisonAlien]

you can use this script for idat processing and differential expression analysis but for GO analysis you will have to find other sources.

[questionaire]

Hello PoisonAlien:

I have used that script before the generate differential expression analysis. I was wondering if you know of any R packages that can get me GO Analysis? Thank you.

Answer 1

[Benn]

Probably asked and answered before:

Best Practice Approach In R To Processing Illumina Microarrays For Rna Profiling