is there any source for TF(transcription factor)-TG(target gene)?
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8.0 years ago
Kurban ▴ 230

Hello guys, I have more than 800 animal transcription factor sequences from ensemble. I want to find their target gene sequences. Could anyone tell how could I do that? Is there any source (or database) for TF(transcription factor)-TG(target gene) information of Drosophila Melanogaster and Caenorhabditis Elegans?

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Quite a few tools and suggestions on this Biostar question: How To Identify Targets Of A Transcription Factor?: How To Identify Targets Of A Transcription Factor ?

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8.0 years ago

DBD might be what you are looking for. Even though I'm not that expert.

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