MCF-7 Cell Line DNA Sequence Data

Question

[bioinformatics.cancer]

Hi, We are planning to analyze some cancer cell lines for variants such as mutations, gene fusions and structural variants. I am looking for sequencing data for MCF-7 cell line. I have been able to find RNA-seq sequencing data from CCLE but cannot find DNA sequencing data. Does anyone know if MCF-7 DNA sequencing data exists and is available for download. Thanks, - Pankaj

Answer 1

[poisonAlien]

CCLE has MCF7 DNA sequencing. You need to login though.

Answer 2

[ATpoint]

MCF-7 is an ENCODE cell line. You should find plenty of different types of NGS data there.