Can edgeR take normalized readcount table directly (I want to use other functions of edgeR but I prefer to normalize the data mysefl)
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8.0 years ago
muhe1985 ▴ 20

Can edgeR take normalized readcount table directly (I want to use other functions of edgeR but I prefer to normalize the data myself)

Thank you!

The question is the same as in the title

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If you want to normalize the data yourself, why do you want to use edgeR?

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There are other functions in edgeR that I want to use

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What/ How are you doing normalization by yourself?

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