Entering edit mode
8.0 years ago
felix.kuo.1211
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10
I have use BLASTx maping some rRNA file(NR database). And I try DAVID but it say that
You are either not sure which identifier type your list contains, or less than 80% of your list has mapped to your chosen identifier type. Please use the Gene Conversion Tool to determine the identifier type.
My NR is new, its format is accession number. How to make KEGG pathway?
What kind of data do you have? rRNA as in ribosomal RNA or regular RNAseq? Can you post a few example ID's?
This is from BlastX.
Most of those ID's appear to be for microbial proteins so that is one of the likely reasons why not many are mapping. What kind of genome is this data from? Could you repeat this analysis with a related genome rather than
nr
?