How to get one several fasts files in one text file from Blast+
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8.0 years ago
Mohamed ▴ 70

Dear Biostars,

I'm learning standalone Blast+. I installed it on windows and wish to know what is the command line to extract the best or top 5 sequences (for example) as fast sequences to get them in one text output file.

Thanks a lot. Mohamed

Blast+ standalone • 1.6k views
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Try using -max_target_seqs 5 as a parameter

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Many thanks biofalconch. If I may ask if there is a website for completely beginners for Blast+. Anyway, many thanks.

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8.0 years ago
Mohamed ▴ 70

Many thanks biofalconch. If I may ask if there is a website for completely beginners for Blast+. Anyway, many thanks.

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