Haplotype Mapping from a VCF file (Homologous SNPs)
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8.0 years ago
sv91707 ▴ 10

Dear All, I'm looking for mapping haplotypes in a VCF file. Is there a way I can at least plot the markers and see visually, or any way I can map haplotype blocks from a single sample VCF file (Not a multisample) ?

Thanks.

haplotype SNP VCF • 2.5k views
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4.6 years ago
gubrins ▴ 350

Heys, I'm interested in doing the same as you, did you solve it at the end?

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