Entering edit mode
7.9 years ago
Genosa
▴
160
Hi, sorry if this is a rather basic terminal question. I have a set of RNAseq output file which is in the current format:
gene condition replicate fpkm
B2M untreated 0 800
B2M Untreated 1 900
B2M untreated 2 850
B2M treated 0 909
B2M treated 1 980
B2M treated 2 809
And I wish to change the data to the format:
Gene untreated untreated untreated treated treated treated
B2M 800 900 850 909 980 809
What kind of command should I use please? Thank you!
it sounds like a XY problem . Why do you need to transpose this ?
I am trying to make the data fit the GSEA format
please validate or comment your previous questions: How to merge column text files using terminal command? ; Terminal command for extracting & filter row data from large RNAseq TXT files ; GSEA blue and pink o'gram - how are they plotted? ; Calculating number of reads for paired end reads? ; ...