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8.0 years ago
Talip Zengin
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0
I use jActiveModules plugin at Cytoscape_3.4.0 version to find 100 active subnetworks in human gene expression list. The plugin creates 100 subnetwork (under humanPPI network) consisting protein name list at node table and protein interactions (P1 (pp) P2) at edge table. Another result (jActiveModules Search Result 0) gives 100 module names with their jActiveModules.activepathScores at node table. I need all protein names at subnetworks and active path scores. But I could not find how to export/save the results of this search at this Cytoscape version.
The same question has been asked at the Cytoscape Helpdesk where it is being addressed https://groups.google.com/forum/#!topic/cytoscape-helpdesk/5djotg8r5us