PCA Scatterplot matrices in R
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7.8 years ago
tesfadej2003 ▴ 10

Hi,

I have the first 10 eigenvectors from Eigenanalysis (PCA) of the genotype data. Now, I want to see the correlation and Scatterplot matrices of 10 principal components in R. Does anyone have experience, who would help me?

Thank you.

PCA R Scatterplot matrices • 3.2k views
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A correlation of the eigenvectors? They're orthogonal...

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Yes, you are correct. However, I want the scatter plot of top 10 axes of population variation (eigenvectors). It looks like the figure in the link example

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You can use corMatrix or something along those lines then.

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