where to find mRNA data

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7.9 years ago

mms140130 ▴ 60

hello,

I'm not sure where to find mRNA data in RefSeq: NCBI Reference Sequence Database

is it under RefSeq FTP -> H_sapiens -> RefSeqGene or mRNA_Prot/

can any one help i'm new to genetics

Thanks,

RNA-Seq • 2.2k views

ADD COMMENT • link updated 7.7 years ago by Biostar 20 • written 7.9 years ago by mms140130 ▴ 60

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Are you looking for sequence data or gene expression data?

You can find sequence data in RefSeqGene but if you want gene expression data then look in NCBI GEO or SRA databases.

ADD REPLY • link 7.9 years ago by GenoMax 148k

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Check out this post in case you want to find the sequence data

Get the 5'UTR of a set of genes

ADD REPLY • link 7.9 years ago by IP ▴ 770

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I have attached here screen-shot where you can see how to download. Go to NCBI -> Type organism -> select nucloetide -> mRNA & RefSeq filter on left side panel and send sequences to file.

https://s30.postimg.org/ura1vltsx/Ref_Seq_m_RNA_example.png

https://postimg.org/image/no26fzod9/

ADD REPLY • link 7.9 years ago by #### ▴ 220

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