Cytoscape Motif-Discovery plugin

Question

[The Last Word]

Hi,

I am trying to find possible motifs in my network on Cytoscape. As of now, the only app which gives me soe credible results is Motif-Discovery. However, that app gives the z-score of all my predictions as zero. Can you please tell me why that is happening. Also, please suggest alternate motif finding apps on cytoscape (version 3+) with a tutorial if possible.

Answer 1

[piet.amc]

Hi, sorry for the slow reply but you might want to contact the app author directly; their mail address is here: http://apps.cytoscape.org/apps/motifdiscovery Other than that a search for motif in the app store might direct you to usable apps: http://apps.cytoscape.org/search?q=motif Hope this helps, Piet