Trimming gapped ends from a multiple alignment error

Question

[a.moner]

Hi, there is a previous post Trimming gapped ends from a multiple alignment. I tried it but I got this error cut: invalid byte, character or field list. can someone help me with that THANKS

[ddiez]

Hi, please include the link to the previous post in your question. Also, include the R libraries and the commands you used that ended up in error. Ideally, a minimum reproducible example (that is, code that we can copy/paste and run in our computers in order to reproduce the error). If not, the output of traceback() and sessionInfo() could be valuable to anyone trying to help.

[a.moner]

hi this is the link to the previous post C: Trimming gapped ends from a multiple alignment

[ddiez]

There are several suggestions in that post. Which one you used? You tagged your question as R, but none of the options offered in that post are about R scripts (there is one bash script). Do you want to do this in R?

[a.moner]

yes I used bash script trimend.sh