Entering edit mode
7.7 years ago
zeyuchen2016
•
0
#=======================================
#
# Aligned_sequences: 2
# 1: 11111111
# 2: 00000000
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3678
# Identity: 3387/3678 (92.1%)
# Similarity: 3387/3678 (92.1%)
# Gaps: 285/3678 ( 7.7%)
# Score: 16911.0
#
#
#=======================================
11111111 751 AGCACTGGTACCTTAGTGGTAAATGAGAAGATGAAAGAAATGGATCAGAA 800
||||||||||||||||||||||||||||||||||.|||||||||||||||
00000000 466 AGCACTGGTACCTTAGTGGTAAATGAGAAGATGAGAGAAATGGATCAGAA 515
11111111 801 ATACCAGGTTGCAGAGAAGACCAAATCAGCATTAGCAGCTGCAGAACAGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
00000000 516 ATACCAGGTTGCAGAGAAGACCAAATCAGCATTAGCAGCTGCAGAACAGA 565
11111111 851 CAGTCTCTACTGCTGGCTCTGCAATCATGAGTAACAGATACATCCTTACA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
00000000 566 CAGTCTCTACTGCTGGCTCTGCAATCATGAGTAACAGATACATCCTTACA 615
for example,I want to get SNPs the locations,may be in my result,i also need to get gaps location. but, i couldn't think a way to find them. could you help me?
The format is false,i give it in photo.