Entering edit mode
7.7 years ago
agicict
▴
200
Hello.
I am studying glioblastoma (GBM) and its four subtypes were established based on microarray data (TCGA 2010).
I have only RNA-seq data without microarray and want to know subtypes of my samples individually.
As far as I know, there is no paper where authors predict GBM's four subtypes based on RNA-seq data.
I would like to know any method or paper which can solve my issue.
Thank you.
Maybe you can start with/use principal components analysis?
How did the array paper do it?