Functional/pathway annotation in bins
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7.7 years ago
h.l.wong ▴ 70

Hi all,

I have some bins in fasta file and are submitting to RAST, where they can be converted to amino acid fasta files(faa).

I am using GhostKOALA to see what kind of genes/pathways are in the bins but it's taking a long time and I can only analysis the file one at a time.

Is there any other programs that can also annotate functional genes in the bins, along with the number of those genes inside?

Cheers and many thanks

Alan

sequence • 1.2k views
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