tajima D, nucleotide diversity and haplotype diversity
0
1
Entering edit mode
7.6 years ago
wanjahi.njau ▴ 10

how do you compute tajima D, nucleotide diversity and haplotype diversity using VCF tools if you have data of 8 populations of 1 individual each

snp • 2.7k views
ADD COMMENT
0
Entering edit mode

Unfortunately I think your sample size isn't big enough to make those analysis. One individual per population isn't enough to have meaningful information on your populations.

ADD REPLY

Login before adding your answer.

Traffic: 1793 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6