how to get a list of genes affected by a transcription factor?

Question

[galkimhi123]

i'm working on a gene that codes for a transcription factor and I want to know all the genes that are either associated with that gene or are affected by the transcription factor directly. which database should i go to?

[Benn]

If you mean interaction with 'associated', you can try the string db. You can look in GEO for ChIP-seq experiments with your TF, or design a experiment yourself if it's not done yet!

[Biojl]

In which species are your working?

[galkimhi123]

Working with Human...

[Biojl]

Check ENCODE: https://www.encodeproject.org/

[galkimhi123]

thanks for the info!