Entering edit mode
7.6 years ago
Jacob
▴
10
I was running blastn on the command line queries like this one
blastn -query Acan -db nr -out "blastOutput/AcanHomo sapiens_blast.txt" -evalue 0.00001 -outfmt 6 -entrez_query "Homo sapiens[Organism] AND refseq[filter]" -remote
Were working fine. After I tried to run some commands like
nohup ./script.sh
screen ./script.sh
./script.sh ^Z bg disown %1
The query's no longer finished I also ran about 60 or so queries in a loop. Does blast have some sort of limit for people?
Thank-you
Are you running more than one
-remote
instance at the same time? This may be the problem: