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7.5 years ago
chen
★
2.5k
Recently, Memorial Sloan Kettering Cancer Center (MSKCC) published their 10000 tumor patients DNA sequencing data on nature medicine, but the website to use the data is too complicated and not convenient.
I developed an online tool with very simple UI to query MSK-IMPACT data. Just search by gene and mutation, the result will show the samples having this mutation, along with these samples' clinical information.
The tool is at: http://opengene.org/msk
Here is a screenshot:
It would be ideal if you can put up a help or tutorial button. What should be the entry value in the mutation tab?
You should input AAChange, which means amino acid change, like L858R, according to HGVS standard.
Yes I figured it out. It's working. I thought it's still in beta so for newbies if a tutorial or help button is there it will be good.
Yes, it's in beta. Thanks for your suggestion, I put an example on the placeholder, and now it should be easier to understand.
Add an example screenshot (if you can) so people know what output to expect. Looks clean and fast!
Thanks, will do it soon.