Entering edit mode
7.5 years ago
mufernando
▴
10
My question is described in the title.
I thought it was phased, but according to VCFtools it isn't:
vcftools --vcf dgrp2.vcf --phased --out teste
VCFtools - UNKNOWN
(C) Adam Auton and Anthony Marcketta 2009
Parameters as interpreted:
--vcf immune.vcf
--out teste
--phased
After filtering, kept 205 out of 205 Individuals
After filtering, kept 0 out of a possible 39929 Sites
No data left for analysis!
Run Time = 1.00 seconds
Am I doing something wrong or is DGRP unphased?
Thanks!
nobody has a clue of what's going on here?