Rfam v 12.0

Question

[yangzituo]

Hi All,

I want to download the latest Rfam for making database and blasting my small RNA clean reads to remove non-mirna. However, I cannot find the Rfam 12.0.fasta in the Rfam ftp. Only find over 2500+ RF*.fasta but don't know how to use it.

Anyone can help me? Thanks a lot!!!

Answer 1

[h.mon]

Go to Rfam search site, at the left panel select "Entry type", then select "microRNA" from the tree. About how to use them, read the latest Rfam documentation.