Entering edit mode
7.4 years ago
ryanzapotocny
•
0
I am looking for a way to find a relationship between a set of 10 SNP's and all other SNPs in the genome. I want to know if there is any correlation between these SNP's being 'CATGCATGAC' and other SNP's or sets of SNP's in the genome. I have a VCF file containing thousands of plant lines and have been trying to use PLINK to find any correlation but am struggling.
