Question

Katz centrality of nodes.

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7.4 years ago

miglanivarnika.26 ▴ 20

Hey, How to calculate Katz centrality of genes using python? Thank you in advance Please help me

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ADD COMMENT • link updated 7.4 years ago by Jean-Karim Heriche 27k • written 7.4 years ago by miglanivarnika.26 ▴ 20

score 0 · Answer 1 · 2017-07-17

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7.4 years ago

Jean-Karim Heriche 27k

Can't you use Google ? I am not a python programmer but the first result gives it in the NetworkX module.

ADD COMMENT • link 7.4 years ago by Jean-Karim Heriche 27k

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Networkx module is for the katz centrality of a gene, but I want it for two classes of genes. I have done that but it's not giving me correct answer.

ADD REPLY • link 7.4 years ago by miglanivarnika.26 ▴ 20

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Centrality is a node property. If you want it for several genes, either you collapse these genes into one node or you combine the measures for the different genes (e.g. average).