AnnotationDbi using UCSC annotation
0
0
Entering edit mode
7.4 years ago
jadepinket ▴ 10

Below is the error I get, any suggestions would be helpful

res$symbol <- mapIds(TxDb.Hsapiens.UCSC.hg38.knownGene, keys=row.names(res), column="CDSNAME", keytype="TXID", multiVals="first")

Error in .testForValidKeys(x, keys, keytype, fks) : None of the keys entered are valid keys for 'TXID'. Please use the keys method to see a listing of valid arguments.

RNA-Seq AnnotationDbi UCSC • 1.9k views
ADD COMMENT

Login before adding your answer.

Traffic: 1415 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6