convert SRA file into forward and reverse fastq files
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7.4 years ago
sunna_j • 0

I have downloaded .sra data from the SRA (Study SRP022224, Run SRR848976) with SRA Toolkit. I tried to convert it into the fastq files with fastq-dump, but I am not getting two files (one forward, one reverse). I'm just getting one fastq-file. What is my fault?

next-gen sequencing • 4.2k views
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Get the fastq files directly from EBI-ENA.

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6.3 years ago
gtrwst9 • 0

fastq-dump --split-3 SRR...

This does NOT redownload everything.

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