methods to compare two gene regulatory networks
2
0
Entering edit mode
7.3 years ago

what are different methods available to compare two GRNs and detect differences between them.

gene gene regulatory networks • 2.0k views
ADD COMMENT
1
Entering edit mode
7.3 years ago

found graphlet based metrics

ADD COMMENT
1
Entering edit mode
7.3 years ago
smho ▴ 40

If you can import them to Cytoscape, it has tools to find the union, intersection, etc of the two networks.

You may also have a look at Lichtblau et al. and Ghazalpour et al.

ADD COMMENT
1
Entering edit mode

I agree, there you could use DyNet app (http://apps.cytoscape.org/apps/dynet)

ADD REPLY
0
Entering edit mode

Thank you but I am not looking for tools I am looking for methods through which two networks can be compared

ADD REPLY

Login before adding your answer.

Traffic: 2170 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6