Population Genetics Data analysis using Arlequin

0

Entering edit mode

7.3 years ago

Inquisitive8995 ▴ 280

Hi All, I am trying to find the Fst and Distance between population datasets using the Arlequin tool. It requires files in .arp format whereas i have the files in Plink ped & map formats and binary files. I used PGDSpider to convert it to .arp format but it shows an error saying "unable parse data: Not enough memory" I used the command given in manual to increase the space but still face the same problem. Is there any other way with which i can convert plink files to .arp format ? Is there any other tool which can aid in this process ?? Hope to receive an answer soon. Thanks in advance

Population Genetics Arlequin PGDSpider • 3.2k views

ADD COMMENT • link updated 6.6 years ago by HG ▴ 30 • written 7.3 years ago by Inquisitive8995 ▴ 280

1

Entering edit mode

Hi, I got the same error!Did you find any solution for that?

ADD REPLY • link 6.6 years ago by HG ▴ 30

2

Entering edit mode

Arlequin appears to be no longer supported. Take a look at my comment here: C: Convert Plink to Arlequin

ADD REPLY • link 6.6 years ago by Kevin Blighe 88k

Login before adding your answer.