Normal pediatric brain samples (RNA-Seq/ Whole-Genome-Bisulfite)

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7.3 years ago

ResearchR ▴ 120

Dear fellow researchers,

I am struggling with the following problem - I am conducting a study on pediatric brain tumors, but to make my analysis complete, I would need normal/ healthy pediatric brain samples as controls.

I searched the internet for public/ non-public data bases, but all I could find was (at best) affymetrix data. Does anyone of you know a database, which has RNA-Seq (ribosomal depleated) and Whole-Genome-Bisulfite data for normal pediatric brain??

Thanks guys and best wishes,

Chris

RNA-Seq next-gen sequencing • 1.7k views

ADD COMMENT • link updated 7.2 years ago by Biostar 20 • written 7.3 years ago by ResearchR ▴ 120

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The Human Developmental Biology Resource (HDBR) has got RNA-Seq data for pre-natal brains. It may be worth contacting them to check if they have the data you are looking for.

ADD REPLY • link 7.3 years ago by Denise CS ★ 5.2k

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That might be difficult to find, because that would require healthy kids undergo brain surgery for getting the samples. Just saying.

ADD REPLY • link 7.3 years ago by Michael 55k

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I know...what is sometimes done is that brain tissue is taken from patients, who died of some condition not related to the nerval system. This is the sad part of the story...

ADD REPLY • link 7.3 years ago by ResearchR ▴ 120

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