Mageck pathway command
0
0
Entering edit mode
7.3 years ago
11yj3312 ▴ 20

I obtain a pathway summary by using mageck pathway command,as follows: id num neg|score neg|p-value neg|fdr neg|rank neg|goodsgrna pos|score pos|p-value pos|fdr pos|rank pos|goodsgrna KEGG_RIBOSOME 87 8.3272e-23 2.6473e-05 0.001238 1 50 0.051213 0.20927 0.841006 38 4 KEGG_SPLICEOSOME 125 3.7084e-08 2.6473e-05 0.001238 2 41 0.52219 0.80968 0.99902 149 13 KEGG_PROTEASOME 44 1.9586e-06 2.6473e-05 0.001238 3 18 0.52149 0.80905 0.99902 148 5 How can I kown the genes in each pathway?

software error sequence gene • 1.7k views
ADD COMMENT
0
Entering edit mode

Anyone knows how to do it?

ADD REPLY

Login before adding your answer.

Traffic: 1633 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6