Convert Nucleotide Gi Numbers To Arabidopsis At Numbers
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13.7 years ago
K Browning ▴ 20

I received a large amount of proteomic data, but it is tagged to the nucleotide gi number and I want the Arabidopsis AT number for the gene. Is there a method to do this easily?

conversion identifiers • 4.0k views
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is it converting GI number file to AT number? Please put some sample of the file.

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13.7 years ago
Darked89 4.7k

Try Picr @EBI. http://www.ebi.ac.uk/Tools/picr/

It maps one set of identifiers to another, including TAIR. Be aware that for some IDs there may be not one-2-one mappings (i.e. Q9FGQ2 maps to AT5G50800.1 and At5g50800 but this is OK).

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13.7 years ago
Bert Overduin ★ 3.7k

Another option would be Ensembl Genomes Plants BioMart:

http://plants.ensembl.org/biomart/martview

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