use of wildcards in globus ls on jgi#portal endpoint
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7.2 years ago

Hello, I am trying to find all files whose names contain the term 'illumina' in the folder

/~/By_Proposal_ID/1697-1713/1701/Microbial_communities_in_biological_carbon_sequestration__Joice_ThreeSqA_D1_[AP12_2]/IMG_Data

in the jgi#portal endpoint. When I set ep1 to the id for this endpoint and ran the command:

globus ls $ep1:/~/By_Proposal_ID/1697-1713/1701/Microbial_communities_in_biological_carbon_sequestration__Joice_ThreeSqA_D1_[AP12_2]/IMG_Data

everything works fine and I get the list of all files in the above folder.

On the other hand if I run:

globus ls $ep1:/~/By_Proposal_ID/1697-1713/1701/Microbial_communities_in_biological_carbon_sequestration__Joice_ThreeSqA_D1_[AP12_2]/IMG_Data/*illumina*

I get an error. How do I solve this problem ? Thanks in advance. Ambarish Nag.

globus file transfer JGI globus endpoint • 1.4k views
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