RIGER extension in GENE-E

Question

[ashwani.vit]

Hello all,

I am trying to make RIGER work through GENE-E. Earlier I tried adding the RIGER extension to home directory as instructed at https://software.broadinstitute.org/GENE-E/extensions.html. But could not make it work.

Has anyone faced any issue similar to above while using RIGER through GENE-E. Are there any other alternative tools for RIGER analysis? Please let me know. Thank you

Regards, Ashwani

[h.mon]

What means "could not make it work"? What were the error messages? What was the command you used?

[ashwani.vit]

Hi,

This is what I did

1) Download the RIGER.jar file

2) Put it in the extensions directory. (/home/GENE-E/extensions)

3) Launched the GENE-E

After launching GENE-E (GUI), where should I navigate to find the RIGER option? I am not getting any error message. I am having difficulty in navigating RIGER extension. Please help.

Thank you Ashwani

Answer 1

[natallah]

After launching GENE-E, it will be under the "Tools" tab