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7.2 years ago
Pappu
★
2.1k
I was trying to run sleuth for differential expression analysis. But I don't have the kallisto bootstrap values. I am wondering if it can run without bootstrap estimates.
If you have no bootstraps I'm pretty sure you can't prep the quantification for Sleuth. I had this issue when trying to run Salmon converted estimates (no bootstraps) in Sleuth and it threw an error.