Uploading bed3 format into Guitar package in R
0
0
Entering edit mode
7.2 years ago
blur ▴ 280

Hi,

I want to upload bed3 format to R for a guitar plot I followed the manual which states:

> bed3=system.file("extdata", "H3K4me3_mm10_1000peaks.bed", package="Guitar")

but when I open the bed3 file [head(bed3)] - this file is empty. Any ideas what I am doing wrong? Thanks!

RNA-Seq R guitar • 1.5k views
ADD COMMENT
0
Entering edit mode

figured it out: you can skip this step and go straight to bed3 <- import.bed("file.bed")

ADD REPLY

Login before adding your answer.

Traffic: 2745 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6