problems with DEPICT software input

Question

[alessandrotestori7]

Hi! I'm having troubles using DEPICT software. It's all right as long as I run depict.py with the test files, but when I change parameters in depict.py (path_snpfile, path_results) I don't get as many results as I get with the test files (gene enrichment, gene prioritization and tissue enrichment). Has anybody had any experience with this software? Please let me know.

Answer 1

[alessandrotestori7]

Hi! I found out that DEPICT needs at least ten independent loci to run the analyses.