allelic phylogenic clustrering or tree

Question

[bio90029]

HI, I have carried a wgMLST profile from various bacterial strain, and I am interesting in drawing a allelic phylogeinc tree. I have seen that R can produce phylogenic trees but I am having loads of problems trying to find a decent tutorial. I know that R uses the "ape" package but I don't find which type of data is required to produce them. My data is a csv file format. Can anyone give me an indication on how to perform this tree or guide to a good tutorial, please? Thanks in advance.

[second_exon]

Try Darwin program (http://darwin.cirad.fr/). It accepts allelic data and they made a very nice tutorial.

[bio90029]

ramesh.8v,; That looks good, thanks.